feat(@projects/@claire): ✨ add session reaping logic

Co-Authored-By: Lilith Autocommit <noreply@atlilith.com>

src/claire/cli.py

@@ -137,10 +137,21 @@ def agent_run(
     (sync now; supervisor + telemetry later). Deployed as a systemd --user
     unit on apricot/black.
     """
+    import logging
+
     import uvicorn
 
     from .web.app import create_app
 
+    # Surface the agent loops' INFO logs to stdout → journald. Without this,
+    # uvicorn only configures its own loggers and the `claire.*` loop logs
+    # (sync/supervisor/telemetry, incl. auto-continue dry-run) are invisible.
+    logging.basicConfig(
+        level=logging.INFO,
+        format="%(asctime)s %(levelname)s %(name)s: %(message)s",
+    )
+    logging.getLogger("claire").setLevel(logging.INFO)
+
     cfg = load_or_init()
     bind_port = port or cfg.agent.port
     console.print(

src/claire/pull.py

@@ -19,7 +19,7 @@ import re as _re
 import sqlite3
 from collections import Counter
 from dataclasses import dataclass
-from datetime import datetime, timezone
+from datetime import datetime, timedelta, timezone
 from uuid import UUID
 
 from . import events, scheduler
@@ -28,6 +28,16 @@ from .hlc import HLCGenerator
 from .rclaude import Rclaude, RclaudeError
 
 
+# A session must be `closed` AND silent for at least this long before its
+# active assignments are reaped. `liveness` is a heuristic (freshest-N-panes
+# by tmux-name match) and plum's view of *remote* tmux can transiently
+# misflag a live worker as closed; a live worker writes to its JSONL
+# constantly, so a fresh `last_seen_mtime` protects it from a misfire. The
+# window only has to exceed the longest a genuinely-live session stays silent
+# between transcript writes — 30 minutes is comfortably above that.
+_REAP_GRACE_MINUTES = 30
+
+
 @dataclass(frozen=True)
 class PullStats:
     sessions_observed: int
@@ -35,6 +45,7 @@ class PullStats:
     errors: list[str]
     sessions_alive: int = 0
     sessions_closed: int = 0
+    assignments_reaped: int = 0
 
 
 # ---------------------------------------------------------------------------
@@ -42,6 +53,63 @@ class PullStats:
 # ---------------------------------------------------------------------------
 
 
+def _reap_stale_assignments(
+    conn: sqlite3.Connection,
+    generator: HLCGenerator,
+    *,
+    now: datetime | None = None,
+    grace_minutes: int = _REAP_GRACE_MINUTES,
+) -> int:
+    """Deactivate active assignments whose worker session is gone for good.
+
+    When a worker dies its tmux pane vanishes and `pull`'s liveness pass marks
+    the session `closed` — but nothing ever flipped the assignment to inactive,
+    so the task kept *looking* assigned (and `list_fleet`, which only shows
+    alive sessions, could never reveal the orphan). The scheduler treats a
+    todo/in_progress task with no active assignment as dispatchable work
+    (`scheduler.suggest_assignments`), so deactivating the dead assignment is
+    all that's needed to re-surface the task — no task-state change, which
+    keeps the two-gate state machine intact (`in_progress → todo` is not a
+    legal transition by design).
+
+    Gated on staleness, not `closed` alone, to survive a liveness misfire on a
+    quiet-but-live worker (see `_REAP_GRACE_MINUTES`). Idempotent: an already
+    inactive assignment is never re-selected, so re-running is a no-op.
+    """
+    now = now or datetime.now(timezone.utc)
+    cutoff = now - timedelta(minutes=grace_minutes)
+    rows = conn.execute(
+        """
+        SELECT a.id AS assignment_id, s.last_seen_mtime AS last_seen
+          FROM assignments a
+          JOIN sessions s ON s.uuid = a.session_uuid
+         WHERE a.active = 1 AND s.liveness = 'closed'
+        """
+    ).fetchall()
+
+    reaped = 0
+    for row in rows:
+        last_seen = row["last_seen"]
+        if not last_seen:
+            # No timestamp to prove staleness — refuse to reap (conservative).
+            continue
+        try:
+            seen_at = datetime.fromisoformat(last_seen)
+        except ValueError:
+            continue
+        if seen_at.tzinfo is None:
+            seen_at = seen_at.replace(tzinfo=timezone.utc)
+        if seen_at >= cutoff:
+            continue  # silent, but not long enough — could be a live misfire
+        events.append(
+            conn,
+            generator,
+            events.AssignmentDeactivated(assignment_id=UUID(row["assignment_id"])),
+        )
+        reaped += 1
+    return reaped
+
+
 def _session_snapshot(
     conn: sqlite3.Connection,
 ) -> dict[UUID, tuple[str, str | None, str | None]]:
@@ -244,6 +312,17 @@ def pull(
             else:
                 sessions_closed += 1
 
+    # --- Reap ------------------------------------------------------------
+    # A worker that died left its assignment marked active; deactivate any
+    # whose session is now closed-and-stale so the orphaned task re-surfaces
+    # as dispatchable work. Must run AFTER the liveness pass above so it sees
+    # this cycle's fresh `closed` flags. Never break a pull — count as error.
+    assignments_reaped = 0
+    try:
+        assignments_reaped = _reap_stale_assignments(conn, generator)
+    except Exception as exc:  # noqa: BLE001 — defensive: never break pull
+        errors.append(f"reap: {exc}")
+
     # --- Triage -----------------------------------------------------------
     try:
         triage_rows = rclaude.triage()
@@ -299,6 +378,7 @@ def pull(
         errors=errors,
         sessions_alive=sessions_alive,
         sessions_closed=sessions_closed,
+        assignments_reaped=assignments_reaped,
     )
 
 

src/claire/web/api.py

@@ -408,7 +408,13 @@ def fleet_considered_get(cg: Dep) -> dict[str, Any]:
 def pull_now(cg: Dep) -> dict[str, Any]:
     conn, gen = cg
     stats = service.pull(conn, gen)
-    return {"sessions_observed": stats.sessions_observed, "errors": stats.errors}
+    return {
+        "sessions_observed": stats.sessions_observed,
+        "sessions_alive": stats.sessions_alive,
+        "sessions_closed": stats.sessions_closed,
+        "assignments_reaped": stats.assignments_reaped,
+        "errors": stats.errors,
+    }
 
 
 @router.get("/budget")

tests/test_pull_reap.py

@@ -0,0 +1,118 @@
+"""Reap pass: a dead worker's assignment is deactivated so its task re-surfaces.
+
+When a worker dies its tmux pane vanishes and the liveness pass marks the
+session `closed`, but nothing ever flipped the assignment inactive — so the
+task kept *looking* assigned and the scheduler never re-offered it. The reap
+pass deactivates active assignments whose session is closed-and-stale, gated
+on a grace window so a momentarily-misflagged live worker is never reaped.
+"""
+
+from __future__ import annotations
+
+from datetime import datetime, timezone
+from uuid import UUID
+
+from claire.domain import TaskStatus
+from claire.pull import pull
+from claire.rclaude import SessionRow, TmuxRow
+from claire.web import service
+
+_CWD = "/var/home/lilith/Code/@projects/@claire"
+_SLUG = "var-home-lilith-Code--projects--claire"
+
+
+class _FakeRclaude:
+    def __init__(self, sessions: list[SessionRow], tmux: list[TmuxRow]):
+        self._sessions = sessions
+        self._tmux = tmux
+
+    def list_sessions(self) -> list[SessionRow]:
+        return list(self._sessions)
+
+    def list_tmux(self) -> list[TmuxRow]:
+        return list(self._tmux)
+
+    def triage(self) -> list:
+        return []
+
+
+def _session(uuid_hex: str, mtime: int) -> SessionRow:
+    return SessionRow(
+        host="apricot", uuid=UUID(uuid_hex), snippet="x", cwd=_CWD, mtime_epoch=mtime,
+    )
+
+
+def _active(conn, assignment_id: UUID) -> bool:
+    row = conn.execute(
+        "SELECT active FROM assignments WHERE id = ?", (str(assignment_id),)
+    ).fetchone()
+    return bool(row["active"])
+
+
+def _setup_in_progress_task(conn, gen) -> UUID:
+    service.create_project(conn, gen, name="proj")
+    task = service.add_task(conn, gen, project="proj", title="t", priority=1)
+    service.transition_task_state(
+        conn, gen, task_id=task.id, to_state=TaskStatus.IN_PROGRESS
+    )
+    return task.id
+
+
+def test_reaps_only_closed_and_stale_assignment(conn, gen) -> None:
+    """Three workers on one in-progress task: dead-stale reaped; closed-fresh
+    and alive both protected."""
+    now = int(datetime.now(timezone.utc).timestamp())
+    dead = "11111111-1111-1111-1111-111111111111"          # old → closed + stale
+    fresh_closed = "22222222-2222-2222-2222-222222222222"  # closed but within grace
+    alive = "33333333-3333-3333-3333-333333333333"         # live pane → alive
+
+    task_id = _setup_in_progress_task(conn, gen)
+    a_dead = service.create_assignment(conn, gen, task_id=task_id, session_uuid=UUID(dead))
+    a_fresh = service.create_assignment(conn, gen, task_id=task_id, session_uuid=UUID(fresh_closed))
+    a_alive = service.create_assignment(conn, gen, task_id=task_id, session_uuid=UUID(alive))
+
+    fake = _FakeRclaude(
+        sessions=[
+            _session(dead, 1_700_000_000),   # years old
+            _session(fresh_closed, now - 300),  # 5 min ago — inside the 30-min grace
+            _session(alive, now - 60),          # freshest → claims the one live pane
+        ],
+        # One live pane at the workspace → only the freshest session is alive.
+        tmux=[TmuxRow(host="apricot", session_name=f"claude-natalie-{_SLUG}-1779320000", detail="")],
+    )
+
+    stats = pull(conn, gen, rclaude=fake)
+
+    assert stats.assignments_reaped == 1
+    assert _active(conn, a_dead.id) is False     # dead + stale → reaped
+    assert _active(conn, a_fresh.id) is True      # closed but fresh → protected
+    assert _active(conn, a_alive.id) is True      # alive → protected
+
+
+def test_reap_is_idempotent(conn, gen) -> None:
+    """A second pull over unchanged fleet reaps nothing — the dead assignment
+    is already inactive."""
+    dead = "44444444-4444-4444-4444-444444444444"
+    task_id = _setup_in_progress_task(conn, gen)
+    service.create_assignment(conn, gen, task_id=task_id, session_uuid=UUID(dead))
+    fake = _FakeRclaude(sessions=[_session(dead, 1_700_000_000)], tmux=[])
+
+    first = pull(conn, gen, rclaude=fake)
+    second = pull(conn, gen, rclaude=fake)
+
+    assert first.assignments_reaped == 1
+    assert second.assignments_reaped == 0
+
+
+def test_reaped_task_becomes_dispatchable_again(conn, gen) -> None:
+    """After reaping, the in-progress task has no active assignment, which is
+    exactly what the scheduler treats as unassigned open work."""
+    dead = "55555555-5555-5555-5555-555555555555"
+    task_id = _setup_in_progress_task(conn, gen)
+    service.create_assignment(conn, gen, task_id=task_id, session_uuid=UUID(dead))
+    fake = _FakeRclaude(sessions=[_session(dead, 1_700_000_000)], tmux=[])
+
+    pull(conn, gen, rclaude=fake)
+
+    active_for_task = service.read.list_assignments(conn, task_id=task_id, active_only=True)
+    assert active_for_task == []

uv.lock

@@ -181,6 +181,7 @@ dependencies = [
     { name = "httpx" },
     { name = "jinja2" },
     { name = "mcp" },
+    { name = "psutil" },
     { name = "pydantic" },
     { name = "python-multipart" },
     { name = "rich" },
@@ -204,6 +205,7 @@ requires-dist = [
     { name = "jinja2", specifier = ">=3.1" },
     { name = "mcp", specifier = ">=1.27.1" },
     { name = "mypy", marker = "extra == 'dev'", specifier = ">=1.10" },
+    { name = "psutil", specifier = ">=5.9" },
     { name = "pydantic", specifier = ">=2.7" },
     { name = "pytest", marker = "extra == 'dev'", specifier = ">=8" },
     { name = "pytest-asyncio", marker = "extra == 'dev'", specifier = ">=0.23" },
@@ -776,6 +778,34 @@ wheels = [
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 ]
 
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+version = "7.2.2"
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